clawbio-pharmgx-reporter

# 🦖 PharmGx Reporter Generate a pharmacogenomic report from consumer genetic data (23andMe, AncestryDNA). ## What it does 1. Parses raw genetic data files (auto-detects 23andMe or AncestryDNA format) 2. Extracts 31 pharmacogenomic SNPs across 12 genes 3. Calls star alleles and determines metabolizer phenotypes 4. Looks up CPIC drug recommendations for 51 medications 5. Generates a markdown report with gene profiles, drug tables, and alerts ## Genes covered CYP2C19, CYP2D6, CYP2C9, VKORC1, SLCO1B1, DPYD, TPMT, UGT1A1, CYP3A5, CYP2B6, NUDT15, CYP1A2 ## Drug classes Antiplatelet, opioids, statins, anticoagulants, PPIs, antidepressants (TCAs, SSRIs, SNRIs), antipsychotics, NSAIDs, oncology, immunosuppressants, antivirals ## Usage ```bash python pharmgx_reporter.py --input patient_data.txt --output report ``` ## Disclaimer This tool is for research and educational purposes only. It is NOT a diagnostic device. Always consult a healthcare professional before making any medication decisions.